Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs111369355 chr10:43487170 G/GA 5.35E-6 288 25.63 26.4 16.12 KM Plot
KIRP rs111380564 chr10:43194771 A/G 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs111403388 chr21:44306756 G/C 0.000151 289 25.58 40.7 13.07 KM Plot
KIRP rs111422875 chr21:44295629 C/T 0.000151 289 25.58 40.7 13.07 KM Plot
KIRP rs111458489 chr2:128499439 A/AC 1.33E-6 285 25.97 21.67 8.47 KM Plot
KIRP rs111463995 chr2:128508053 G/A 1.33E-6 285 25.97 21.67 8.47 KM Plot
KIRP rs111484028 chr17:30287701 G/A 2.52E-12 283 26.6 24.3 10.37 KM Plot
KIRP rs111485799 chr21:44287486 G/C 0.000151 289 25.58 40.7 13.07 KM Plot
KIRP rs111487299 chr10:43207158 G/A 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs111517468 chr10:43154833 G/A 6.46E-5 288 25.57 27.75 11.43 KM Plot
KIRP rs11153237 chr6:110798019 G/A 4.34E-6 281 18.57 22.57 26.4 KM Plot
KIRP rs111575234 chr21:44231618 A/T 0.000106 284 25.23 40.7 13.07 KM Plot
KIRP rs111580377 chr10:43186633 G/A 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs111583381 chr21:44268289 T/C 0.000167 287 25.57 43.53 13.07 KM Plot
KIRP rs11158829 chr14:70557635 A/G 2.56E-6 288 10.83 29.5 25.37 KM Plot